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Bioinformatic projects I worked on in the past
Takes output from GeneScan software, perform automated cleaning and exon assignment. Source code not released. Contact me at email@example.com if you wish to use acquire it.
Pangenome conserved sites analysis
Mining Brassica genomes with HMM for homologs of Arabidopsis thaliana gene to get pangenome conserved sites. GitHub
Hunting jumping genes
Undergrad assignment. Found positions, orientation and functional consequence of the transposon inserts in the genome of yeast strain S288C using next-generation sequencing data. GitHub
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